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1OP2

Crystal Structure of AaV-SP-II, a Glycosylated Snake Venom Serine Proteinase from Agkistrodon acutus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Temperature [K]298
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths119.430, 42.830, 44.940
Unit cell angles90.00, 99.61, 90.00
Refinement procedure
Resolution20.000

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- 2.100
R-factor0.165
Rwork0.165
R-free0.21100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle25.200

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.150
High resolution limit [Å]2.1002.100
Rmerge0.083

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0.208

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Number of reflections12259
Completeness [%]92.379.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.3

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298Zhu, Z., (2003) Acta Crystallogr., Sect.D, 59, 547.

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)in distilled water
21reservoirsodium cacodylate30 (mM)pH6.3
31reservoir27 (%(w/v))

226707

PDB entries from 2024-10-30

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