1OP2
Crystal Structure of AaV-SP-II, a Glycosylated Snake Venom Serine Proteinase from Agkistrodon acutus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 119.430, 42.830, 44.940 |
Unit cell angles | 90.00, 99.61, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.100 |
R-factor | 0.165 |
Rwork | 0.165 |
R-free | 0.21100 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 25.200 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.083 * | 0.208 * |
Number of reflections | 12259 | |
Completeness [%] | 92.3 | 79.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.3 * | 298 | Zhu, Z., (2003) Acta Crystallogr., Sect.D, 59, 547. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | in distilled water |
2 | 1 | reservoir | sodium cacodylate | 30 (mM) | pH6.3 |
3 | 1 | reservoir | 27 (%(w/v)) |