Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1OOJ

Structural genomics of Caenorhabditis elegans : Calmodulin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-D
Synchrotron siteAPS
Beamline14-BM-D
Temperature [K]100
Detector technologyCCD
Collection date2002-08-08
DetectorADSC QUANTUM 4
Wavelength(s)1.107
Spacegroup nameC 1 2 1
Unit cell lengths103.394, 23.997, 60.770
Unit cell angles90.00, 112.14, 90.00
Refinement procedure
Resolution30.000 - 2.110
R-factor0.223
Rwork0.212
R-free0.27100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4cln
RMSD bond length0.007
RMSD bond angle1.120

*

Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000

*

2.190
High resolution limit [Å]2.1102.110
Rmerge0.071

*

0.202

*

Total number of observations29757

*

Number of reflections8241
<I/σ(I)>129.3
Completeness [%]99.799.8
Redundancy3.23.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6

*

295PH 5.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295.0K, RESERVOIR: MPD, PEG3350, DIOXANE, 5 MM CACL2, 50 MM CITRATE, PH 5.7, PROTEIN STOCK: 5 MG/ML IN 5 MM CACL2, 5 MM CACODYLATE, PH 6, DROPS: 5 MICROLITERS OF PROTEIN STOCK SOLUTION, 5 MICROLITERS OF RESERVOIR.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropisopropanol20 (mM)
21drop5 (mM)
31dropsodium cacodylate5 (mM)pH6.
41dropprotein5 (mg/ml)
51reservoirMPD50 (%(v/v))
61reservoirPEG335045 (%(w/v))
71reservoirdioxane12 (%(v/v))
81reservoir5 (mM)
91reservoirsodium citrate50 (mM)pH5.7

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon