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1OHG

STRUCTURE OF THE DSDNA BACTERIOPHAGE HK97 MATURE EMPTY CAPSID

Replaces:  1FH6
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]277
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths579.700, 626.650, 787.200
Unit cell angles90.00, 89.90, 90.00
Refinement procedure
Resolution190.130 - 3.450
R-factor0.373
Rwork0.373
R-free0.36300

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)CRYO EM RECONSTRUCTION
RMSD bond length0.010
RMSD bond angle24.400

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAVE
Refinement softwareCNS (1.1)
Data quality characteristics
 Overall
Low resolution limit [Å]190.000
High resolution limit [Å]3.440
Rmerge0.160
Number of reflections4797606
<I/σ(I)>9.6
Completeness [%]63.0
Redundancy1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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7.5

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Wikoff, W.R., (1998) Virology, 243, 113.

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirpotassium phosphate50 (mM)pH7.0
21reservoirPEG80001.0-1.5 (%)
31reservoirammonium sulfate0.9 (M)
41dropTris-HCl20 (mM)pH7.5
51drop100 (mM)
61drop2-mercaptoethanol1 (mM)
71dropprotein27-30 (mg/ml)

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PDB entries from 2024-11-13

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