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1OGE

The Structure of Bacillus subtilis RbsD complexed with Ribose 5-phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Temperature [K]295
Spacegroup nameC 1 2 1
Unit cell lengths123.807, 108.556, 83.532
Unit cell angles90.00, 128.72, 90.00
Refinement procedure
Resolution30.000 - 2.050
R-factor0.194
Rwork0.194
R-free0.22700
Structure solution methodDIRECT METHODS
RMSD bond length0.006
RMSD bond angle1.268
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]2.050
Rmerge0.048

*

0.225

*

Total number of observations236173

*

Number of reflections48339
Completeness [%]90.380.7

*

Redundancy2.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.4

*

pH 6.00
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris-HCl20 (mM)pH7.4
31drop0.2 (M)
41dropdithiothreitol2 (mM)
51reservoirPEG400020 (%)
61reservoirisopropyl19 (%)
71reservoirsodium cacodylate100 (mM)pH6.5

240971

PDB entries from 2025-08-27

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