1OF2
Crystal structure of HLA-B*2709 complexed with the vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH | 
| Source type | SYNCHROTRON | 
| Source details | EMBL/DESY, HAMBURG BEAMLINE X13 | 
| Synchrotron site | EMBL/DESY, HAMBURG | 
| Beamline | X13 | 
| Temperature [K] | 100 | 
| Detector technology | CCD | 
| Collection date | 2002-11-15 | 
| Detector | MARRESEARCH | 
| Spacegroup name | P 1 21 1 | 
| Unit cell lengths | 51.158, 81.635, 65.310 | 
| Unit cell angles | 90.00, 107.47, 90.00 | 
Refinement procedure
| Resolution | 29.100  * - 2.200 | 
| R-factor | 0.191 | 
| Rwork | 0.188 | 
| R-free | 0.24400 | 
| Structure solution method | MOLECULAR REPLACEMENT | 
| Starting model (for MR) | 1k5n | 
| RMSD bond length | 0.010 | 
| RMSD bond angle | 1.300  *  | 
| Data reduction software | DENZO | 
| Data scaling software | SCALEPACK | 
| Phasing software | MOLREP | 
| Refinement software | REFMAC (5.1.19) | 
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 29.100 | 2.280 | 
| High resolution limit [Å] | 2.200 | 2.200 | 
| Rmerge | 0.123 *  | 0.346 *  | 
| Number of reflections | 25005 | 2495 *  | 
| <I/σ(I)> | 9.7 | 4.1 | 
| Completeness [%] | 95.8  *  | 96.8  *  | 
| Redundancy | 3.1 | 3.0  *  | 
Crystallization Conditions
| crystal ID | method | pH | temperature | details | 
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5  *  | 291 | TRIS PH 8.5, 19% PEG 8000 HANGING DROP, TEMPERATURE 291K | 
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details | 
| 1 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.5 | 
| 2 | 1 | reservoir | PEG8000 | 19 (%) | |
| 3 | 1 | drop | protein | 16 (mg/ml) | |
| 4 | 1 | drop | Tris-HCl | 10 (mM) | pH7.5 | 
| 5 | 1 | drop | 150 (mM) | 






