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1ODV

Photoactive yellow protein 1-25 deletion mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Collection date2000-11-15
Spacegroup nameP 43 21 2
Unit cell lengths82.566, 82.566, 63.453
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution17.000 - 1.140
R-factor0.1473
R-free0.17740
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2phy
RMSD bond length0.010
RMSD bond angle2.000

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHELX
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]17.0001.180
High resolution limit [Å]1.1401.140
Rmerge0.0600.217
Total number of observations299780

*

Number of reflections75208

*

<I/σ(I)>13.54.3
Completeness [%]94.489.2
Redundancy43.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

6.5

*

CRYSTALS WERE GROWN BY EQUILIBRATION OF 1 ML OF 30 MG/ML PROTEIN WITH 1 ML OF MOTHER LIQUOR (1.8 M AMMONIUM SULPHATE, 10 MM COCL[2], 100 MM MES PH 6.5) AGAINST A 1 ML RESERVOIR OF MOTHER LIQUOR. CRYSTALS APPEARED AFTER 2-3 DAYS A LARGEST DIMENSION OF 0.4 MM.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111protein30 (mg/ml)
212ammonium sulfate1.8 (M)
31210 (mM)
412MES100 (mM)

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PDB entries from 2025-06-18

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