1ODV
Photoactive yellow protein 1-25 deletion mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Collection date | 2000-11-15 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 82.566, 82.566, 63.453 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.000 - 1.140 |
R-factor | 0.1473 |
R-free | 0.17740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2phy |
RMSD bond length | 0.010 |
RMSD bond angle | 2.000 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELX |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 17.000 | 1.180 |
High resolution limit [Å] | 1.140 | 1.140 |
Rmerge | 0.060 | 0.217 |
Total number of observations | 299780 * | |
Number of reflections | 75208 * | |
<I/σ(I)> | 13.5 | 4.3 |
Completeness [%] | 94.4 | 89.2 |
Redundancy | 4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 6.5 * | CRYSTALS WERE GROWN BY EQUILIBRATION OF 1 ML OF 30 MG/ML PROTEIN WITH 1 ML OF MOTHER LIQUOR (1.8 M AMMONIUM SULPHATE, 10 MM COCL[2], 100 MM MES PH 6.5) AGAINST A 1 ML RESERVOIR OF MOTHER LIQUOR. CRYSTALS APPEARED AFTER 2-3 DAYS A LARGEST DIMENSION OF 0.4 MM. |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 30 (mg/ml) | |
2 | 1 | 2 | ammonium sulfate | 1.8 (M) | |
3 | 1 | 2 | 10 (mM) | ||
4 | 1 | 2 | MES | 100 (mM) |