Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1ODF

Structure of YGR205w protein.

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
Collection date2001-04-15
DetectorMARRESEARCH
Spacegroup nameP 43 21 2
Unit cell lengths64.850, 64.850, 140.130
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.250
R-factor0.2063
Rwork0.206
R-free0.26000

*

Structure solution methodMAD
RMSD bond length0.007
RMSD bond angle1.195

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE/RESOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.320
High resolution limit [Å]2.2502.250
Rmerge0.0550.499
Total number of observations94854

*

Number of reflections14707
<I/σ(I)>33.23.9
Completeness [%]98.998.4
Redundancy6.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8

*

18

*

2.4M AMMONIUM SULFATE, 0.1M NA CITRATE PH5.6, pH 6.00
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4 (mg/ml)
21dropTris-HCl25 (mM)pH8
31reservoirammonium sulfate1.9 (M)
41reservoirsodium acetate0.1 (M)pH4.5

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon