1O8V
The crystal structure of Echinococcus granulosus fatty-acid-binding protein 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-02-15 |
Detector | ADSC CCD |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.714, 54.834, 38.691 |
Unit cell angles | 90.00, 100.34, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.600 |
R-factor | 0.174 |
Rwork | 0.172 |
R-free | 0.21400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1PMP CHAIN A |
RMSD bond length | 0.012 |
RMSD bond angle | 1.400 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.100 * | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.043 | 0.066 |
Total number of observations | 81862 * | |
Number of reflections | 15644 | |
<I/σ(I)> | 35 | 14.7 |
Completeness [%] | 99.8 | 98.6 |
Redundancy | 5.23 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 8.3 * | 30% (V/V) MMEPEG 5000, 0.1 M TRIS-HCL,PH 8.6,0.1 M NAAC. |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 30 (mM) | pH8.3 |
3 | 1 | reservoir | PEG5000 MME | 30 (%(v/v)) | |
4 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.6 |
5 | 1 | reservoir | sodium acetate | 0.1 (M) |