Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1O8M

Pectate Lyase C from Erwinia Chrysanthemi at pH 4.5 with no Ca2+ Added

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RT3000
Temperature [K]293
Detector technologyAREA DETECTOR
DetectorSDMS
Spacegroup nameP 21 21 21
Unit cell lengths72.940, 80.750, 95.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.200
R-factor0.1767
Rwork0.177
R-free0.21480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1air
RMSD bond length0.007
RMSD bond angle24.760

*

Data reduction softwareSDMS
Data scaling softwareSDMS
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 Overall
Low resolution limit [Å]10.000
High resolution limit [Å]2.200
Rmerge0.048
Total number of observations133466

*

Number of reflections47189
<I/σ(I)>10.4
Completeness [%]99.4
Redundancy3.45

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

6.9

*

4

*

Yoder, M. D., (1990) J. Biol. Chem., 265, 11429.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (A280/ml)
21dropammonium sulfate1.0 (M)
31dropHEPES50 (mM)
41drop1 (mM)
51reservoirammonium sulfate2.0 (M)
61reservoirHEPES0.1 (M)

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon