Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1O83

Crystal Structure of Bacteriocin AS-48 at pH 7.5, phosphate bound. Crystal form I

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]120
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameI 2 2 2
Unit cell lengths79.670, 83.880, 99.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 1.640
R-factor0.195
Rwork0.193
R-free0.21480

*

Structure solution methodSIRAS
RMSD bond length0.010

*

RMSD bond angle1.314

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.4301.730
High resolution limit [Å]1.6401.640
Rmerge0.0850.518
Number of reflections37078
<I/σ(I)>19.431.4
Completeness [%]90.090
Redundancy4.34.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.5CRYSTAL WAS GROWN USING VAPOUR DIFFUSION TECHNIQUES FROM DROPS CONTAINING AS-48 (20 MG/ML) AND RESERVOIR SOLUTION (0.1 M HEPES-NA PH 7.5, 0.8 M MONO-SODIUM DIHYDROGEN PHOSPHATE) IN A 1:1 RATIO
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21dropTris-HCl10 (mM)pH7.5
31reservoirammonium sulfate0.2 (M)
41reservoirsodium acetate trihydrate0.1 (M)pH4.5
51reservoirPEG400015 (%(w/v))
61reservoirsodium-Hepes0.1 (M)pH7.5
71reservoirmono-sodium dihydrogen phosphate0.8 (M)

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon