1O7M
NAPHTHALENE 1,2-DIOXYGENASE, BINARY COMPLEX WITH DIOXYGEN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2001-12-15 |
Detector | RIGAKU MSC |
Spacegroup name | H 3 2 |
Unit cell lengths | 140.277, 140.277, 208.754 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 1.750 |
Rwork | 0.178 |
R-free | 0.18800 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1eg9 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.629 * |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Refinement software | REFMAC (5.0.36) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.790 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.063 | 0.321 |
Total number of observations | 293928 * | |
Number of reflections | 80092 | |
<I/σ(I)> | 10.2 | 2.2 |
Completeness [%] | 94.0 | 86.5 |
Redundancy | 3.67 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6 | 8 * | Carredano, E., (2000) J. Mol. Biol., 296, 701. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 30 (mg/ml) | |
2 | 1 | reservoir | ammonium sulfate | 2 (M) | |
3 | 1 | reservoir | dioxane | 2-3 (%) | |
4 | 1 | reservoir | MES | 50 (mM) |