1O4Y
THE THREE-DIMENSIONAL STRUCTURE OF BETA-AGARASE A FROM ZOBELLIA GALACTANIVORANS
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-08-03 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.38482, 1.38561 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.314, 57.487, 89.054 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.800 * - 1.480 |
R-factor | 0.149 |
Rwork | 0.148 |
R-free | 0.17600 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.600 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 14.800 * | |
High resolution limit [Å] | 1.480 | |
Rmerge | 0.083 * | 0.374 * |
Total number of observations | 454198 * | |
Number of reflections | 42255 * | |
<I/σ(I)> | 15.6 | |
Completeness [%] | 99.7 * | 99.7 * |
Redundancy | 3.9 * | 3.7 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 20.5 * | 28% PEG 8000, 200 mM Ammonium sulphate, 100 mM Sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 2.5 (mg/ml) | |
2 | 1 | drop | Tris | 50 (%(w/v)) | pH7.5 |
3 | 1 | drop | 25 (mM) | ||
4 | 1 | reservoir | PEG8000 | 28 (%) | |
5 | 1 | reservoir | ammonium sulfate | 200 (mM) | |
6 | 1 | reservoir | sodium acetate | 100 (mM) | pH4.6 |