1NYI
Crosslinked Hammerhead Ribozyme Initial State
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2001-12-01 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 1.15 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 65.639, 65.639, 137.475 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 19.750 * - 2.850 |
| R-factor | 0.21 * |
| Rwork | 0.203 |
| R-free | 0.23000 * |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | urx 057 |
| RMSD bond length | 0.010 |
| RMSD bond angle | 2.007 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | CNS |
| Refinement software | REFMAC (5.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 100.000 * | 2.923 |
| High resolution limit [Å] | 2.850 | 2.850 |
| Rmerge | 0.072 | 0.349 |
| Total number of observations | 8413 * | |
| Number of reflections | 7544 | |
| <I/σ(I)> | 13.8 | 2.2 |
| Completeness [%] | 99.3 * | 99.3 |
| Redundancy | 5.2 | 5.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5 * | 16 * | 1.8 M Lithium sulphate and 50 mM sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 20.0K |
Crystallization Reagents
| ID | crystal ID | solution ID | reagent name | concentration | details |
| 1 | 1 | 1 | LiSO4 | ||
| 2 | 1 | 1 | sodium cacodylate | ||
| 3 | 1 | 2 | LiSO4 |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | ribozyme | 1 (mM) | |
| 2 | 1 | drop | sodium acetate | 50 (mM) | pH5.0 |
| 3 | 1 | drop | 1.8 (M) | ||
| 4 | 1 | reservoir | sodium acetate | 50 (mM) | pH5.0 |
| 5 | 1 | reservoir | 1.8 (M) | ||
| 6 | 1 | reservoir | EDTA | 1.0 (mM) |






