1NVF
Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+, ADP and carbaphosphonate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-05-01 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 206.500, 136.400, 40.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 * - 2.800 |
R-factor | 0.184 |
Rwork | 0.184 |
R-free | 0.26900 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nr5 |
RMSD bond length | 0.006 * |
RMSD bond angle | 1.230 * |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 2.900 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.080 * | 0.250 * |
Number of reflections | 27530 | |
<I/σ(I)> | 16.28 | 4.17 |
Completeness [%] | 94.5 * | 81.4 * |
Redundancy | 3.46 * | 2.67 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 * | 277 | Nichols, C.E., (2001) Acta Crystallogr., Sect.D, 57, 306. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15-25 (mg/ml) | |
2 | 1 | reservoir | PEG6000 | 9 (%) | |
3 | 1 | reservoir | HEPES | pH7.5 | |
4 | 1 | reservoir | ethylene glycol | 20 (%) | |
5 | 1 | reservoir | DMSO | 10 (%) | |
6 | 1 | reservoir | MEGA7 | 5 (mM) |