Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NL1

BOVINE PROTHROMBIN FRAGMENT 1 IN COMPLEX WITH CALCIUM ION

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]110
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths39.188, 53.443, 128.173
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.000

*

- 1.900
R-factor0.219
Rwork0.219
R-free0.25300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2pf2
RMSD bond length0.019
RMSD bond angle23.900

*

Phasing softwareAMoRE
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.0001.970
High resolution limit [Å]1.9001.900
Rmerge0.0770.379
Total number of observations150545

*

Number of reflections216582064

*

<I/σ(I)>18.52.6
Completeness [%]98.396.3
Redundancy7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

7.6pH 7.6
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG800020 (%(w/v))
21reservoir0.5 (M)
31reservoir10 (mM)
41reservoirHEPES50 (mM)pH7.6

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon