1NKO
Energetic and structural basis of sialylated oligosaccharide recognition by the natural killer cell inhibitory receptor p75/AIRM1 or Siglec-7
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE F1 |
| Synchrotron site | CHESS |
| Beamline | F1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2000-05-20 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 0.9 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 32.461, 49.715, 39.787 |
| Unit cell angles | 90.00, 113.08, 90.00 |
Refinement procedure
| Resolution | 15.000 * - 1.450 |
| R-factor | 0.277 |
| Rwork | 0.277 |
| R-free | 0.21800 * |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1qfo |
| RMSD bond length | 0.010 * |
| RMSD bond angle | 1.640 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | AMoRE |
| Refinement software | CNS (1.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 15.000 | 15.000 |
| High resolution limit [Å] | 1.450 | 1.450 |
| Rmerge | 0.060 * | 0.388 * |
| Total number of observations | 238401 * | |
| Number of reflections | 20819 * | |
| Completeness [%] | 89.3 * | 68.6 * |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion, hanging drop * | 5.5 * | 277 * | Dimasi, N., (2003) Acta Crystallogr., D59, 1856. * |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 3 (mg/ml) | |
| 2 | 1 | drop | MES | 25 (mM) | pH5.5 |
| 3 | 1 | reservoir | PEG8000 | 20 (%(w/v)) | |
| 4 | 1 | reservoir | 0.2 (M) | ||
| 5 | 1 | reservoir | phosphate-citrate | 0.1 (M) | pH4.2 |






