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1NIO

Crystal structure of beta-luffin, a ribosome inactivating protein at 2.0A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]290
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameC 1 2 1
Unit cell lengths89.902, 59.823, 55.184
Unit cell angles90.00, 120.81, 90.00
Refinement procedure
Resolution29.210 - 2.000
R-factor0.162
Rwork0.162
R-free0.20300
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle23.000

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000

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2.070
High resolution limit [Å]2.0002.000
Rmerge0.1110.422

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Total number of observations60539

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Number of reflections17034

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Completeness [%]99.698.9

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Redundancy3.54

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirTris-HCl0.05 (M)pH7.5
21reservoirammonium sulfate40 (%(w/v))
31dropprotein40 (mg/ml)
41drop0.15 (M)
51drop0.1 (%(w/v))

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PDB entries from 2024-11-06

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