1NEN
Complex II (Succinate Dehydrogenase) From E. Coli with Dinitrophenol-17 inhibitor co-crystallized at the ubiquinone binding site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-2 |
Synchrotron site | ESRF |
Beamline | ID14-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-07-07 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9150 |
Spacegroup name | H 3 2 |
Unit cell lengths | 138.800, 138.800, 521.900 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.000 - 2.900 |
R-factor | 0.271 |
Rwork | 0.271 |
R-free | 0.29600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 21.200 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.960 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.116 * | 0.428 * |
Total number of observations | 119504 * | |
Number of reflections | 42735 | |
Completeness [%] | 98.1 | 96.6 |
Redundancy | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.2 | 20 * | Tris-HCl, CaCl2, PEG 400, BaCl2, ethylene glycol, DNP17, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.2 |
2 | 1 | reservoir | 0.2 (M) | ||
3 | 1 | reservoir | PEG400 | 24-29 (%) | |
4 | 1 | reservoir | 0.01 (M) | ||
5 | 1 | reservoir | ethylene glycol | 3 (%) |