1ND7
Conformational Flexibility Underlies Ubiquitin Ligation Mediated by the WWP1 HECT domain E3 Ligase
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1999-10-01 |
Detector | MARRESEARCH |
Wavelength(s) | 0.979, 0.980, 0.972 |
Spacegroup name | P 1 |
Unit cell lengths | 45.200, 50.850, 58.430 |
Unit cell angles | 113.47, 99.21, 102.26 |
Refinement procedure
Resolution | 32.080 - 2.100 |
Rwork | 0.243 |
R-free | 0.27700 * |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 21.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.000 * | |
High resolution limit [Å] | 2.200 * | |
Rmerge | 0.033 * | 0.324 * |
Number of reflections | 21708 | |
Completeness [%] | 97.0 * | 99 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 4 * | ammonium acetate, beta-mercaptoethanol, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | succinic acid | 100 (mM) | pH5.5 |
3 | 1 | reservoir | ammonium acetate | 0.75-1.0 (M) | |
4 | 1 | reservoir | beta-mercaptoethanol | 20 (mM) |