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1NA5

INTEGRIN ALPHA M I DOMAIN

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-1
Synchrotron siteSSRL
BeamlineBL9-1
Temperature [K]100
Detector technologyCCD
Collection date2001-05-02
DetectorADSC QUANTUM 4
Wavelength(s)0.976
Spacegroup nameP 21 21 21
Unit cell lengths38.370, 50.930, 102.380
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.500
R-factor0.209
Rwork0.209
R-free0.22700

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1jlm
RMSD bond length0.004

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RMSD bond angle1.240

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.560
High resolution limit [Å]1.5001.500
Rmerge0.025

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0.222

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Total number of observations125137

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Number of reflections35988

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Completeness [%]98.492.9

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8

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23

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PEG 8000, sodium chloride, potassium citrate, pH 4.2, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11drop100 (mM)
21drop5 (mM)
31dropTris20 (mM)pH8.0
41dropprotein10 (mg/ml)
51reservoir0.2 (M)
61reservoirPEG800020 (%)
71reservoirpotassium citrate0.1 (M)pH4.2

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PDB entries from 2024-05-01

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