1NA5
INTEGRIN ALPHA M I DOMAIN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-05-02 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.976 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.370, 50.930, 102.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.500 |
R-factor | 0.209 |
Rwork | 0.209 |
R-free | 0.22700 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jlm |
RMSD bond length | 0.004 * |
RMSD bond angle | 1.240 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.560 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.025 * | 0.222 * |
Total number of observations | 125137 * | |
Number of reflections | 35988 * | |
Completeness [%] | 98.4 | 92.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 * | 23 * | PEG 8000, sodium chloride, potassium citrate, pH 4.2, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | 100 (mM) | ||
2 | 1 | drop | 5 (mM) | ||
3 | 1 | drop | Tris | 20 (mM) | pH8.0 |
4 | 1 | drop | protein | 10 (mg/ml) | |
5 | 1 | reservoir | 0.2 (M) | ||
6 | 1 | reservoir | PEG8000 | 20 (%) | |
7 | 1 | reservoir | potassium citrate | 0.1 (M) | pH4.2 |