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1N1S

Trypanosoma rangeli sialidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-3
Synchrotron siteESRF
BeamlineID14-3
Temperature [K]100
Detector technologyCCD
Collection date2000-06-23
DetectorADSC QUANTUM 4
Wavelength(s)0.931
Spacegroup nameP 21 21 21
Unit cell lengths76.020, 93.970, 105.450
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 1.640
R-factor0.17406
Rwork0.173
R-free0.19300

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1mz5
RMSD bond length0.007
RMSD bond angle1.314
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000

*

1.740
High resolution limit [Å]1.6401.640
Rmerge0.047

*

0.405

*

Total number of observations413311

*

Number of reflections85308
Completeness [%]89.552.5
Redundancy5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7291PEG-8000, sodium cacodylate, ammonium sulfate, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG-8000
211sodium cacodylate
311ammonium sulfate
412ammonium sulfate
512PEG-8000
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropsodium phosphate20 (mM)
31dropsodium acetate30 (mM)pH7.0
41reservoirPEG800016 (%(w/w))
51reservoirsodium cacodylate50 (mM)
61reservoirammonium sulfate100 (mM)pH6.5

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PDB entries from 2024-04-17

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