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1N08

Crystal Structure of Schizosaccharomyces pombe Riboflavin Kinase Reveals a Novel ATP and Riboflavin Binding Fold

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2002-05-02
DetectorMARRESEARCH
Wavelength(s)1.542
Spacegroup nameP 1
Unit cell lengths41.235, 45.321, 52.849
Unit cell angles89.70, 112.04, 98.41
Refinement procedure
Resolution20.000 - 1.600
R-factor0.2235
Rwork0.220
R-free0.25200

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1n06
RMSD bond length0.008
RMSD bond angle1.300

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.640
High resolution limit [Å]1.6001.600
Rmerge0.043

*

0.404

*

Number of reflections42651
Completeness [%]92.5

*

88.5

*

Redundancy3.0

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP820

*

PEG 8000, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropTris-HCl20 (mM)pH8.0
21drop100 (mM)
31dropprotein10 (mg/ml)
41reservoirMES-NaOH0.1 (M)pH6.5
51reservoirmagnesium acetate0.2 (M)
61reservoirPEG800020 (%(w/v))

222415

PDB entries from 2024-07-10

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