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1MZV

Crystal Structure of Adenine Phosphoribosyltransferase (APRT) From Leishmania tarentolae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS BEAMLINE D03B-MX1
Synchrotron siteLNLS
BeamlineD03B-MX1
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1999-08-14
DetectorMARRESEARCH
Spacegroup nameP 61 2 2
Unit cell lengths64.538, 64.538, 234.440
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution28.270 - 2.200
R-factor0.183
Rwork0.181
R-free0.21780

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1qb7
RMSD bond length0.014
RMSD bond angle1.494
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.08)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000

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2.240
High resolution limit [Å]2.2002.200
Rmerge0.060

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Total number of observations229639

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Number of reflections14724

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Completeness [%]99.593.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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74

*

MOPS 100 mM, 22% isopropanol, Protein at 8 mg/ml, pH 7.00, temperature 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein8 (mg/ml)
21dropAMP2 (mM)
31reservoirMOPS100 (mM)pH7.0
41reservoirisopropanol22 (%)

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PDB entries from 2024-11-06

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