1MZU
Crystal Structure of the Photoactive Yellow Protein Domain from the Sensor Histidine Kinase Ppr from Rhodospirillum centenum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 293 |
Detector technology | CCD |
Collection date | 2001-09-05 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.560, 143.070, 36.450 |
Unit cell angles | 90.00, 117.96, 90.00 |
Refinement procedure
Resolution | 40.000 * - 2.000 |
R-factor | 0.247 |
Rwork | 0.245 |
R-free | 0.26900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.540 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 2.130 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.080 * | 0.379 * |
Number of reflections | 19047 * | |
<I/σ(I)> | 3.7 | |
Completeness [%] | 93.2 | 78.9 * |
Redundancy | 4.2 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 36% PEG 6K, 10 mM Tris, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 12 (mg/ml) | |
2 | 1 | reservoir | PEG6000 | 36 (%) | |
3 | 1 | reservoir | MES | 10 (mM) | pH7.0 |