Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1MZU

Crystal Structure of the Photoactive Yellow Protein Domain from the Sensor Histidine Kinase Ppr from Rhodospirillum centenum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]293
Detector technologyCCD
Collection date2001-09-05
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths34.560, 143.070, 36.450
Unit cell angles90.00, 117.96, 90.00
Refinement procedure
Resolution40.000

*

- 2.000
R-factor0.247
Rwork0.245
R-free0.26900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.540

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.000

*

2.130
High resolution limit [Å]2.0002.000
Rmerge0.080

*

0.379

*

Number of reflections19047

*

<I/σ(I)>3.7
Completeness [%]93.278.9

*

Redundancy4.2

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729336% PEG 6K, 10 mM Tris, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein12 (mg/ml)
21reservoirPEG600036 (%)
31reservoirMES10 (mM)pH7.0

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon