1MX0
Structure of topoisomerase subunit
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-01-31 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.1 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 146.655, 219.192, 106.921 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.300 |
R-factor | 0.21854 |
Rwork | 0.214 |
R-free | 0.26300 * |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.423 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.111 * | 0.473 * |
Total number of observations | 2006747 * | |
Number of reflections | 149698 * | |
<I/σ(I)> | 10 | 2.24 |
Completeness [%] | 96.1 * | 88.9 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Batch method * | 7 * | 20 * | PEG 3000, Sodium Citrate, Magnesium Chloride, AMP-PNP, pH 5.5, Microbatch, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | Tris-HCl | 20 (mM) | pH7.0 |
2 | 1 | 1 | 100 (mM) | ||
3 | 1 | 1 | protein | 12 (mg/ml) | |
4 | 1 | 1 | PEG3000 | 20 (%) | |
5 | 1 | 2 | Tris-HCl | 100 (mM) | pH7.0 |
6 | 1 | 2 | 200 (mM) |