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1MF5

GCATGCT Quadruplex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
Collection date2002-05-19
DetectorMARRESEARCH
Wavelength(s)0.811
Spacegroup nameC 2 2 21
Unit cell lengths22.128, 59.215, 45.784
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.100
R-factor0.216
Rwork0.213
R-free0.22400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)UDG028
RMSD bond length0.018
RMSD bond angle0.035
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareSHELX
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.000

*

1.200
High resolution limit [Å]1.1001.100
Rmerge0.1100.370
Total number of observations12514

*

Number of reflections2803

*

<I/σ(I)>10.965.24
Completeness [%]99.399.4
Redundancy7.70

*

6.64

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.6290

*

Cobalt Hexammine, Cacodylate, MPD, NaCl, KCl, pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Cobalt Hexammine
211Cacodylate
311MPD
411NaCl
511KCl
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropsodium cacodylate40 (mM)
21dropcobalt hexammine80 (mM)
31drop10 (%)
41drop800 (mM)
51drop30 (mM)
61dropDNA1 (mM)
71reservoirMPD30 (%)

222926

PDB entries from 2024-07-24

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