1M61
Crystal structure of the apo SH2 domains of ZAP-70
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I711 |
Synchrotron site | MAX II |
Beamline | I711 |
Temperature [K] | 200 |
Detector technology | IMAGE PLATE |
Collection date | 1999-05-06 |
Detector | MARRESEARCH |
Wavelength(s) | 1.0158 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.851, 52.227, 54.455 |
Unit cell angles | 90.00, 89.91, 90.00 |
Refinement procedure
Resolution | 18.850 - 2.500 |
Rwork | 0.245 |
R-free | 0.28800 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1a81 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.390 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | AMoRE |
Refinement software | CNX (2002) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.640 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.062 * | 0.456 * |
Number of reflections | 9426 | |
<I/σ(I)> | 10.2 | 1.7 |
Completeness [%] | 98.1 | 97.8 |
Redundancy | 4.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.8 * | 298 | PEG3350, Sodium chloride, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20 (mg/ml) | |
2 | 1 | drop | sodium phosphate | 100 (mM) | pH6.80 |
3 | 1 | drop | 50 (mM) | ||
4 | 1 | drop | dithiothreitol | 5 (mM) | |
5 | 1 | reservoir | PEG3350 | 20 (%) | |
6 | 1 | reservoir | HEPES | 0.1 (M) | pH8. |
7 | 1 | reservoir | 0.2 (M) | ||
8 | 1 | reservoir | glutathione | 20 (mM) | |
9 | 1 | reservoir | PEG3350 | 15 (%) |