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1M5S

Formylmethanofuran:tetrahydromethanopterin fromyltransferase from Methanosarcina barkeri

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMPG/DESY, HAMBURG BEAMLINE BW6
Synchrotron siteMPG/DESY, HAMBURG
BeamlineBW6
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameC 1 2 1
Unit cell lengths127.100, 83.800, 126.400
Unit cell angles90.00, 108.40, 90.00
Refinement procedure
Resolution30.000

*

- 1.900

*

R-factor0.197
Rwork0.197
R-free0.24800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Formylmethanofuran:tetrahydromethanopterin formyltransferase from Methanopyrus kandleri
RMSD bond length0.007
RMSD bond angle26.400

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (0.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.920
High resolution limit [Å]1.900

*

1.880

*

Rmerge0.037

*

0.081

*

Total number of observations215926

*

Number of reflections99960
Completeness [%]94.084.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

4

*

MPD, sodium citrate, ammonium acetate, HEPES, formylmethanofuran, pH 6.7, VAPOR DIFFUSION, HANGING DROP at 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21dropMOPS10 (mM)pH7.0
31reservoirsodium citrate0.1 (M)
41reservoirammonium acetate0.2 (M)
51reservoirMPD31 (%)
61reservoirHEPES0.1 (M)pH6.7
71reservoirformylmethanofuran5.0 (mM)

225946

PDB entries from 2024-10-09

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