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1M1J

Crystal structure of native chicken fibrinogen with two different bound ligands

Replaces:  1JFE
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2000-12-15
DetectorADSC QUANTUM 4
Spacegroup nameP 1 21 1
Unit cell lengths114.090, 100.020, 200.090
Unit cell angles90.00, 105.79, 90.00
Refinement procedure
Resolution20.000 - 2.700
Rwork0.227
R-free0.25500

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)FRAGMENT D FROM STRUCTURE 1FZC
RMSD bond length0.007
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.740
High resolution limit [Å]2.6502.650
Rmerge0.0840.311
Total number of observations1506048

*

Number of reflections121776
<I/σ(I)>11.1
Completeness [%]94.867.8
Redundancy32.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

7

*

pH 6.50
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein6 (mg/ml)
21drop0.15 (M)
31dropimidazole0.05 (M)pH7.0
41reservoirTMAO0.5 (M)
51reservoirMES0.05 (M)pH6.0
61reservoir1 (mM)
71reservoirsodium azide1 (mM)

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PDB entries from 2024-10-30

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