1LZ7
Glycosyltransferase B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X8C |
Synchrotron site | NSLS |
Beamline | X8C |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 52.800, 149.960, 80.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.650 |
R-factor | 0.186 |
Rwork | 0.181 |
R-free | 0.20500 |
Structure solution method | MAD |
RMSD bond length | 0.010 * |
RMSD bond angle | 1.600 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SnB |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.710 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.054 * | 0.381 * |
Number of reflections | 37031 | |
Completeness [%] | 95.8 | 79.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 18 * | ADA, manganese chloride, ammonium sulfate, MPD, glycerol, PEG 4000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6-8 (mg/ml) | |
10 | 1 | reservoir | ADA | 50 (mM) | pH7.5 |
11 | 1 | reservoir | 10 (mM) | ||
12 | 1 | reservoir | ammonium sulfate | 100 (mM) | |
13 | 1 | reservoir | MPD | 5 (%(v/v)) | |
14 | 1 | reservoir | glycerol | 10 (%(v/v)) | |
15 | 1 | reservoir | PEG4000 | 8-10 (%(w/v)) | |
2 | 1 | drop | ADA | 70 (mM) | pH7.5 |
3 | 1 | drop | sodium acetate | 50 (mM) | pH4.6 |
4 | 1 | drop | 40 (mM) | ||
5 | 1 | drop | 5-8 (mM) | ||
6 | 1 | drop | MPD | 2.5 (%(v/v)) | |
7 | 1 | drop | glycerol | 5 (%(v/v)) | |
8 | 1 | drop | PEG4000 | 2 (%(w/v)) | |
9 | 1 | drop | 3-chloro-Hg-2-methoxy-propylurea | 0.3-0.5 (mM) |