Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1LXM

Crystal Structure of Streptococcus agalactiae Hyaluronate Lyase Complexed with Hexasaccharide Unit of Hyaluronan

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]200
Detector technologyCCD
Collection date2000-12-21
DetectorOXFORD
Wavelength(s)1.0
Spacegroup nameC 2 2 21
Unit cell lengths51.108, 155.043, 238.136
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.200
R-factor0.218
Rwork0.218
R-free0.27100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1f1s
RMSD bond length0.008

*

RMSD bond angle1.272

*

Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.280
High resolution limit [Å]2.2002.200
Rmerge0.144

*

0.921

*

Total number of observations233927

*

Number of reflections45372
Completeness [%]93.771.4
Redundancy5.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8

*

298Jedrzejas, M.J., (2000) Acta Crystallogr., Sect.D, 56, 460.

*

1VAPOR DIFFUSION, HANGING DROP8

*

298Jedrzejas, M.J., (2000) Acta Crystallogr., Sect.D, 56, 460.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoircacodylate100 (mM)pH6.0
21reservoirKSCN30 (mM)
31reservoirPEG5000 MME19 (%)
41dropprotein10 (mg/ml)
51dropHEPES10 (mM)
61dropEDTA2 (mM)pH8.0

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon