1LXI
Refinement of BMP7 crystal structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-09-01 |
Detector | MARRESEARCH |
Wavelength(s) | 0.98 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 101.294, 101.294, 41.812 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.000 * - 2.000 |
R-factor | 0.22873 |
Rwork | 0.228 |
R-free | 0.24400 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1bmp |
RMSD bond length | 0.030 |
RMSD bond angle | 2.462 |
Data reduction software | TRUNCATE |
Data scaling software | CCP4 ((TRUNCATE)) |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 * | 2.080 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.054 * | 0.333 * |
Total number of observations | 67831 * | |
Number of reflections | 15770 | |
<I/σ(I)> | 16.9 | |
Completeness [%] | 93.3 * | 99.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 23 * | 20% MPD, 0.1M Sodium Acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 8 (mg/ml) | |
2 | 1 | reservoir | MPD | 20 (%) | |
3 | 1 | reservoir | sodium acetate | 100 (mM) | pH4.5 |