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1LV2

Hepatocyte Nuclear Factor 4 is a Transcription Factor that Constitutively Binds Fatty Acids

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyCCD
Collection date2000-06-05
DetectorMARRESEARCH
Wavelength(s)1.0
Spacegroup nameI 41 2 2
Unit cell lengths152.708, 152.708, 93.421
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000

*

- 2.700
R-factor0.247
Rwork0.245
R-free0.26800

*

Structure solution methodSIRAS
Starting model (for MR)Built by fitting pieces of secondary structure into density.
RMSD bond length0.009

*

RMSD bond angle1.675

*

Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHARP
Refinement softwareCNS (2000)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000

*

2.800
High resolution limit [Å]2.7002.700
Rmerge0.0480.320

*

Total number of observations1308098

*

Number of reflections18866

*

<I/σ(I)>36.33.5
Completeness [%]98.4

*

93.7

*

Redundancy15.815.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8

*

294ammonium phosphate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 21K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein30 (mg/ml)
21dropTris10 (mM)pH8.0
31dropEDTA0.1 (mM)
41drop150 (mM)
51dropdithiothreitol10 (mM)
61droppropane-diol5 (%)
71reservoirammonium dihydrogen phosphate/diammonium hydrogen phosphate0.75 (M)pH5.0
81reservoirdithiothreitol10 (mM)

218500

PDB entries from 2024-04-17

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