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1LM4

Structure of Peptide Deformylase from Staphylococcus aureus at 1.45 A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]100
Detector technologyCCD
Collection date2001-08-20
DetectorADSC QUANTUM 4
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths38.224, 76.703, 112.116
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000

*

- 1.450
Rwork0.170
R-free0.20000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bs4
RMSD bond length0.015
RMSD bond angle24.900

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.000

*

1.540
High resolution limit [Å]1.450

*

1.450
Rmerge0.055

*

0.154

*

Number of reflections61791
<I/σ(I)>16.8
Completeness [%]99.195.6
Redundancy18.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5

*

20

*

PEG 6000, 0.1 M citric acid pH 5.0, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein27 (mg/ml)
21reservoirPEG600030 (%(w/v))
31reservoircitric acid0.1 (M)pH5.0

219515

PDB entries from 2024-05-08

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