Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1LKF

LEUKOCIDIN F (HLGB) FROM STAPHYLOCOCCUS AUREUS

Experimental procedure
Experimental methodMAD
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date1998-03
DetectorRIGAKU RAXIS IV
Spacegroup nameP 21 21 21
Unit cell lengths39.760, 48.530, 147.510
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.900
R-factor0.196
Rwork0.196
R-free0.28200
Structure solution methodMAD
RMSD bond length0.010
RMSD bond angle28.428

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.970
High resolution limit [Å]1.9001.900
Rmerge0.045

*

0.145

*

Number of reflections20933
<I/σ(I)>2010
Completeness [%]89.758.5
Redundancy3.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

7.5

*

20

*

pH 8.5
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG300025-30 (%(w/v))
21reservoirTris0.1 (M)
31dropprotein4-10 (mg/ml)
41dropHEPES30 (mM)
51drop80 (mM)

243911

PDB entries from 2025-10-29

PDB statisticsPDBj update infoContact PDBjnumon