Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1LDY

HORSE LIVER ALCOHOL DEHYDROGENASE COMPLEXED TO NADH AND CYCLOHEXYL FORMAMIDE (CXF)

Experimental procedure
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X31
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX31
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1996-06
DetectorMARRESEARCH
Spacegroup nameP 1 21 1
Unit cell lengths49.930, 180.200, 86.800
Unit cell angles90.00, 106.00, 90.00
Refinement procedure
Resolution12.000 - 2.500
R-factor0.207

*

Rwork0.207
RMSD bond length0.020
RMSD bond angle0.050
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]12.0002.540
High resolution limit [Å]2.5002.500
Rmerge0.042

*

Number of reflections46126

*

<I/σ(I)>21.8612
Completeness [%]92.981.8
Redundancy2.62.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Microdialysis

*

75

*

PROTEIN WAS CRYSTALLIZED BY THE BATCH DIALYSIS METHOD USING MPD AS THE PRECIPITANT AT PH 7.0, 50 MM AMMONIUM N-[TRIS(HYDROXYMETHYL)METHYL]-2 AMINOETHANESULFONATE, WITH 0.66 MM NADH AND 0.76 MM 3-BUTYLTHIOLANE 1-OXIDE. VERY CLOSE TO C-CENTERED ORTHORHOMBIC BUT SCALES VERY BADLY AS C222. SO THE SYMMETRY IS ACTUALLY P21, batch dialysis
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111alcohol dehydrogenase10 (mg/ml)
212ammonium N-[tris(hydroxymethyl)methyl]-2-aminoethanesulfonate50 (mM)
312NADH0.66 (mM)
412N-cyclohexylformamide10 (mM)
512MPD25 (%)

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon