1LD3
Crystal Structure of B. subilis ferrochelatase with Zn(2+) bound at the active site.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I711 |
Synchrotron site | MAX II |
Beamline | I711 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1998-10-25 |
Detector | MARRESEARCH |
Wavelength(s) | 0.98600 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.636, 49.876, 118.532 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 * - 2.600 |
R-factor | 0.217 |
Rwork | 0.217 |
R-free | 0.27400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1doz |
RMSD bond length | 0.008 |
RMSD bond angle | 21.300 * |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | CNS (1.1) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 * | 2.800 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.128 * | 0.342 * |
Number of reflections | 9203 * | |
Completeness [%] | 95.9 * | 97.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | Hansson, M., (1995) Proteins: Struct.,Funct., Genet., 23, 607. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 0.65 (mg/ml) | |
2 | 1 | drop | PEG2000 | 2.5 (%) | |
3 | 1 | drop | 17 (mM) | ||
4 | 1 | drop | Tris-HCl | 8 (mM) | |
5 | 1 | reservoir | PEG2000 | 30 (%(w/v)) | |
6 | 1 | reservoir | 0.2 (M) | ||
7 | 1 | reservoir | Tris-HCl | 0.1 (M) |