1L6Z
CRYSTAL STRUCTURE OF MURINE CEACAM1A[1,4]: A CORONAVIRUS RECEPTOR AND CELL ADHESION MOLECULE IN THE CEA FAMILY
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-02-06 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0715,1.0718,1.0534 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 111.260, 111.260, 65.640 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 15.000 - 3.320 |
R-factor | 0.297 |
Rwork | 0.295 |
R-free | 0.32900 |
Structure solution method | MAD and Molecular Replacement |
Starting model (for MR) | PDB ENTRIES 1HNF AND 1E4J |
RMSD bond length | 0.011 |
RMSD bond angle | 2.325 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MLPHARE |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.420 |
High resolution limit [Å] | 3.320 | 3.320 |
Rmerge | 0.073 | 0.371 * |
Total number of observations | 123640 * | |
Number of reflections | 7127 * | |
<I/σ(I)> | 17.3 | 3.7 |
Completeness [%] | 99.7 | 100 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 * | 298 | 10% PEG 8000, 0.2 M magnesium acetate, 0.1 M cacodylate, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 * | 298 | 10% PEG 8000, 0.2 M magnesium acetate, 0.1 M cacodylate, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris | 25 (mM) | pH7.6 |
2 | 1 | drop | 150 (mM) | ||
3 | 1 | drop | glycerol | 5 (%) | |
4 | 1 | drop | protein | 0.5-1 (mg) | |
5 | 1 | reservoir | PEG8000 | 10 (%) | |
6 | 1 | reservoir | magnesium acetate | 0.2 (M) | |
7 | 1 | reservoir | cacodylate | 0.1 (M) | pH6.4 |