1L5A
Crystal Structure of VibH, an NRPS Condensation Enzyme
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X12C |
Synchrotron site | NSLS |
Beamline | X12C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-05-21 |
Detector | BRANDEIS - B4 |
Wavelength(s) | 0.9788, 0.9785, 0.9633 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 132.595, 161.349, 115.602 |
Unit cell angles | 90.00, 104.81, 90.00 |
Refinement procedure
Resolution | 34.140 - 2.550 |
R-factor | 0.214 * |
Rwork | 0.214 |
R-free | 0.25900 |
Structure solution method | MAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.410 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 2.640 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.046 * | 0.320 * |
Number of reflections | 73969 | |
<I/σ(I)> | 19.1 | |
Completeness [%] | 93.9 | 58.5 |
Redundancy | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 20 * | used microseeding * |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 20 * | used microseeding * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 12 (mg/ml) | |
2 | 1 | reservoir | Tris | 200 (mM) | pH8.5 |
3 | 1 | reservoir | PEG8000 | 1 (%(w/v)) | |
4 | 1 | reservoir | magnesium formate | 60 (mM) |