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1L3W

C-cadherin Ectodomain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4A
Synchrotron siteNSLS
BeamlineX4A
Temperature [K]100
Detector technologyCCD
Collection date2000-07-30
DetectorADSC QUANTUM 4
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths127.166, 75.135, 129.813
Unit cell angles90.00, 105.50, 90.00
Refinement procedure
Resolution20.000 - 3.080
R-factor0.243
Rwork0.243
R-free0.27600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1edh 1ff5 1ncg
RMSD bond length0.015
RMSD bond angle26.900

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (0.5)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0003.190
High resolution limit [Å]3.0003.080
Rmerge0.109

*

0.372

*

Total number of observations203026

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Number of reflections21748
<I/σ(I)>7.72
Completeness [%]98.598.3
Redundancy2.72.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8

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293PEG 4000, Na-cacodylate, NaCl, MnCl2, CaCl2, pH 5.0, VAPOR DIFFUSION, HANGING DROP at 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris10 (mM)pH8.0
31drop5 (mM)
41drop0.15 (M)
51reservoirPEG40005-8 (%)
61reservoirsodium cacodylate10 (mM)pH5.0
71reservoir0.3 (M)
81reservoir30 (mM)
91reservoir5 (mM)

227561

PDB entries from 2024-11-20

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