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1L3F

Thermolysin in the Absence of Substrate has an Open Conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 4
Wavelength(s).9778
Spacegroup nameP 41 21 2
Unit cell lengths97.052, 97.052, 106.583
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.000 - 2.300
Rwork0.202
R-free0.30200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB MODEL 8TLN
RMSD bond length0.016
RMSD bond angle3.200
Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareAMoRE
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0002.360
High resolution limit [Å]2.3002.300
Rmerge0.096

*

0.540

*

Total number of observations205247

*

Number of reflections22538

*

<I/σ(I)>4.41.4
Completeness [%]96.779.2
Redundancy9.13.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6298MES, dimethylsulfoxide, NaCl, Zn Acetate, pH 6.00, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11drop0.7-0.9 (M)
21dropzinc acetate0.4 (M)
31reservoirammonium sulfate30 (%)

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PDB entries from 2025-07-02

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