1L2G
Structure of a C-terminally truncated form of glycoprotein D from HSV-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-10-10 |
Detector | BRANDEIS - B4 |
Wavelength(s) | 1.100 |
Spacegroup name | P 4 |
Unit cell lengths | 131.416, 131.416, 83.265 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.850 |
R-factor | 0.283 |
Rwork | 0.278 |
R-free | 0.29700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jma |
RMSD bond length | 0.012 |
RMSD bond angle | 1.674 |
Data reduction software | DENZO |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.950 |
High resolution limit [Å] | 2.850 | 2.850 |
Number of reflections | 29319 | |
<I/σ(I)> | 11 | 2.7 |
Completeness [%] | 87.1 | 67.3 |
Redundancy | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 293 | Ammonium Sulfate, pH 9, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K |