1L1F
Structure of human glutamate dehydrogenase-apo form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU300 |
| Temperature [K] | 200 |
| Detector technology | IMAGE PLATE |
| Collection date | 2001-02-14 |
| Detector | RIGAKU RAXIS IV |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 |
| Unit cell lengths | 97.800, 98.800, 124.200 |
| Unit cell angles | 86.26, 70.28, 60.34 |
Refinement procedure
| Resolution | 8.000 - 2.700 |
| R-factor | 0.262 * |
| Rwork | 0.262 |
| R-free | 0.30200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | X-PLOR |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | |
| High resolution limit [Å] | 2.700 | 2.700 * |
| Rmerge | 0.047 * | 0.216 * |
| Number of reflections | 94574 * | 7168 * |
| Completeness [%] | 90.5 | 54.8 * |
| Redundancy | 2.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | PEG 8000, NaCl, sodium phosphate, sodium azide, octyl-b-glucopyranoside, methyl pentanediol, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | octyl-beta-glucopyranoside | 1 (%(w/v)) | |
| 2 | 1 | reservoir | sodium azide | 1 (mM) | |
| 3 | 1 | reservoir | 50 (mM) | ||
| 4 | 1 | reservoir | methyl pentanediol | 8 (%(v/v)) | |
| 5 | 1 | reservoir | sodium phosphate | 0.1 (M) | pH7.3 |
| 6 | 1 | drop | enzyme | 18 (mg/ml) | |
| 7 | 1 | drop | sodium phosphate | 0.1 (M) | pH7.0 |






