Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1KYX

Lumazine Synthase from S.pombe bound to carboxyethyllumazine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]295
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths111.087, 145.178, 128.554
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.460

*

- 2.600
R-factor0.178
Rwork0.174
R-free0.20600

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.440

*

Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.4672.740
High resolution limit [Å]2.6002.600
Rmerge0.070

*

0.420

*

Number of reflections32116
Completeness [%]99.5

*

99.5

*

Redundancy3.7

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7

*

295citrate, ammonium dihydrogen phosphate, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropenzyme10 (mg/ml)
21droppotassium phosphate20 (mM)pH7.0
31drop50 (mM)
41reservoircitrate0.1 (M)pH4.9-5.2
51reservoirsodium formate1.5 (M)

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon