1KV6
X-ray structure of the orphan nuclear receptor ERR3 ligand-binding domain in the constitutively active conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 130 |
Detector technology | CCD |
Collection date | 2001-01-27 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9340 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 83.317, 83.317, 240.610 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 2.700 |
Rwork | 0.233 |
R-free | 0.26700 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PBD ENTRY 3ERD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.513 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 2.810 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.049 * | 0.148 * |
Number of reflections | 23306 | |
Completeness [%] | 96.7 | 99.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 4 * | Tris.HCl, ammonium sulfate, glycerol, pH 8.0, VAPOR DIFFUSION, HANGING DROP at 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | Tris-HCl | 100 (mM) | pH8.0 |
3 | 1 | reservoir | ammonium sulfate | 1.5 (M) | |
4 | 1 | reservoir | glycerol | 15 (%) |