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1KQD

Structure of Nitroreductase from E. cloacae Bound with 2e-Reduced Flavin Mononucleotide (FMN)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]115
Detector technologyIMAGE PLATE
Collection date2000-11-25
DetectorRIGAKU RAXIS IV
Spacegroup nameP 1 21 1
Unit cell lengths52.830, 79.980, 97.250
Unit cell angles90.00, 93.62, 90.00
Refinement procedure
Resolution20.000 - 1.900
R-factor0.188

*

Rwork0.185
R-free0.22000

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle1.100
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.990
High resolution limit [Å]1.9001.900
Rmerge0.0540.143
Number of reflections62505
<I/σ(I)>27.67.5
Completeness [%]97.7

*

88.9

*

Redundancy4.00

*

3.09
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7

*

4

*

homopipes, acetate, PEG 4000, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4.75 (mg/ml)
21dropHEPES10 (mM)pH7.
31drop50 (mM)
41reservoirhomopipes100 (mg/ml)pH4.8
51reservoiracetate25 (mM)
61reservoirPEG400015 (%)

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PDB entries from 2025-07-02

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