1KL1
Crystal Structure of Serine Hydroxymethyltransferase Complexed with Glycine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2001-06-01 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 61.266, 106.400, 56.986 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 1.930 |
Rwork | 0.170 |
R-free | 0.19730 * |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1kkj |
RMSD bond length | 0.008 |
RMSD bond angle | 0.025 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CCP4 |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 15.000 | 2.000 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.043 | 0.073 |
Total number of observations | 80764 * | |
Number of reflections | 27979 | |
<I/σ(I)> | 22.8 | |
Completeness [%] | 97.6 | 90.2 |
Redundancy | 2.88 | 2.65 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 25 * | Hepes MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | HEPES | 100 (mM) | pH7.5 |
2 | 1 | drop | EDTA | 0.2 (mM) | |
3 | 1 | drop | 2-mercaptoethanol | 5 (mM) | |
4 | 1 | drop | 100 (mM) | ||
5 | 1 | drop | protein | 15 (mg/ml) | |
6 | 1 | reservoir | HEPES | 100 (mM) | pH7.5 |
7 | 1 | reservoir | EDTA | 0.2 (mM) | |
8 | 1 | reservoir | 2-mercaptoethanol | 5 (mM) | |
9 | 1 | reservoir | MPD | 50 (%) |