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1KIX

Dimeric Structure of the O. nova Telomere End Binding Protein Alpha Subunit with Bound ssDNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Detector technologyCCD
Collection date1999-09-02
DetectorADSC QUANTUM 4
Wavelength(s)1.000
Spacegroup nameF 4 3 2
Unit cell lengths284.000, 284.000, 284.000
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000

*

- 2.700
R-factor0.208
Rwork0.208
R-free0.24000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alpha N-terminal domains from alpha-beta-ssDNA complex (1OTC)
RMSD bond length0.007
RMSD bond angle1.340

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.0002.760
High resolution limit [Å]2.7002.700
Rmerge0.0750.548
Total number of observations135022

*

Number of reflections27195
<I/σ(I)>16.12
Completeness [%]98.394.5
Redundancy53.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298Ammonium Sulfate, Xylitol, HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111Ammonium Sulfate
211Xylitol
311HEPES
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein14 (mg/ml)
21dropoligonucleotide20-50 (%)molar excess
31reservoirammonium sulfate2.0-2.1 (M)
41reservoirxylitol5 (%(w/v))
51reservoirHEPES50 (mM)pH7.5
61reservoirdithiothreitol2 (mM)
71reservoirsodium azide0.02 (%(w/v))

224004

PDB entries from 2024-08-21

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