1KI3
CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH PENCICLOVIR
Experimental procedure
Temperature [K] | 120 |
Detector technology | IMAGE PLATE |
Collection date | 1996-08 |
Detector | RIGAKU RAXIS IIC |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 113.800, 117.700, 108.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 12.000 - 2.370 |
R-factor | 0.2 |
Rwork | 0.200 |
R-free | 0.31400 |
Structure solution method | MIR + NCS IMPROVEMENT AND SOLVENT FLATTENING FOR ORIGINAL NATIVE, 1KIN |
RMSD bond length | 0.013 |
RMSD bond angle | 23.060 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLOMON |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 2.450 | |
High resolution limit [Å] | 2.370 | 2.370 |
Rmerge | 0.112 * | |
Number of reflections | 28282 | |
<I/σ(I)> | 2 | |
Completeness [%] | 94.5 | 93 |
Redundancy | 4 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.5 | 25 * | pH 7.5 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 1.0 (mg/ml) | |
2 | 1 | drop | Tris-Cl | 40 (mM) | |
3 | 1 | drop | dithiothreitol | 3 (mM) | |
4 | 1 | drop | deoxythymidine | 0.2 (mM) | |
5 | 1 | reservoir | ammonium sulfate | 30 (%sat) | |
6 | 1 | reservoir | Tris-Cl | 200 (mM) | |
7 | 1 | reservoir | dithiothreitol | 3 (mM) | |
8 | 1 | reservoir | deoxythymidine | 0.2 (mM) |