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1KHU

Smad1 crystal structure reveals the details of BMP signaling pathway

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]113
Spacegroup nameH 3
Unit cell lengths138.129, 138.129, 199.340
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.000 - 2.500
R-factor0.239

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Rwork0.239
R-free0.27400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Smad4 active fragment homotrimer
RMSD bond length0.008
RMSD bond angle1.397
Data reduction softwareDENZO
Data scaling softwareSCALA
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]100.0002.570
High resolution limit [Å]2.5002.500
Rmerge0.0650.351

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Total number of observations77509

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Number of reflections47621
<I/σ(I)>10.42
Completeness [%]96.8

*

98.8
Redundancy1.69
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6

*

298alcohol, pH 6.5, EVAPORATION, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirMES50 (mM)pH6.0
21reservoirethanol6 (%)
31dropprotein20 (mg/ml)

222415

PDB entries from 2024-07-10

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